Simple diode rectification burns-up more than 50% of the alternator output as waste heat, while full-wave diode-bridge rectification appears to be ~98% efficient.
Technically, a single diode or 1/2 wave rectification does not increase the heat loss it's just not using the full capacity of the coil. Since a single diode only allows current to flow in one direction, with no current flow in the reverse direction, other than leakage, there is no power loss, or technically minimal power loss. Now there is some power loss (heat loss) in the diode but not a lot. Moving on, FWB is way more efficient because it uses both the positive and negative waveform which means the frequency of the pulses doubled, average voltage is higher...more efficient use of what's available. Put another way, a single diode (1/2 wave rectification) is leaving money on the table.
I actually tried this (FWB) on a standard OEM coil. Short answer - way too much voltage and current for the battery at RPMs greater than ~4000 (from memory). To go even further, on any FWB setup I've tried, 6v or 12v, it needed to be regulated. No one makes a 6v regulator...other than maybe a big honking regulator for a 1950's Ford Red Belly tractor.
"2 coils vs. 3 coils"? Assuming the coils are wound the same, then it comes down to number windings and magnet strength. Without a doubt, power availability will be less on 2 coils vs. 3. The more turns you have, the higher the voltage. But on the same token, the heat loss (power loss) in the windings goes up as well, to a point where the maximum available current you can get out of the stator at 12 volts. Ideally, you need enough wire in the coil (s) such that you can supply the load (i.e.: power the lights and start charging) at about 4000-5000 rpm and don't peak until 8000+.
Maybe this will help. A standard K0 lighting coil has ~150 turns on the yellow (lighting coil) and ~250 turns on the Green (DC). Just as an experiment, I tried reversing it. At about 7000-8000 RPM I got more power out of the yellow winding than I could out of the green winding. Wire size in both windings is the same. However, power loss in the coil (I squared R loss) was less (Y) due to lower losses in the copper winding.
When I wound my last 12v test coil, I put as many turns as possible and it still fit and clear the cam lobe. Worked great. Would supply the load at about 3000-3500 RPM. Looked good, but maxed out at about 30-35 watts. Removed about 50 turns, which pushed out suppling the load to somewhere between 4000-4500 and maxed out at 40+ watts at 8000 RPM.
By the way, I think I'm close to being able to answer your question on what is better - 3,4,5,6 and odd or even coils. I learn a lot by studying Ray's odd situation. I say odd because I can't find another stator anywhere like the one he has ( 3 coils and a 4 magnet flywheel). Another cold or rainy day when my honey do list is small, I think I'll know it well enough to explain it. The light is not on yet but it's starting to glow.